Abstrack simple string matching to a process

The process contains the fingerprinting function along with a queue
representing the sliding window. This means that the user no longer
needs to remember the outgoing character when streaming the text.
This commit is contained in:
Knyffen 2021-11-14 16:19:11 +01:00
parent 76c0d7f49e
commit c6b6329134
7 changed files with 69 additions and 20 deletions

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@ -24,8 +24,8 @@ LDLIBS = # library flags
# -llapacke (LAPACK) NOTE: The order of "-llapacke -llapack -lblas" is very important # -llapacke (LAPACK) NOTE: The order of "-llapacke -llapack -lblas" is very important
#LINK.o = $(CXX) $(LDFLAGS) # use CXX for linking #LINK.o = $(CXX) $(LDFLAGS) # use CXX for linking
simple_string_matching: simple_string_matching.o Rabin_fingerprint.o general_library.o simple_string_matching: simple_string_matching.o Rabin_fingerprint.o general_library.o processes.o
$(CXX) $(CXXFLAGS) simple_string_matching.o Rabin_fingerprint.o general_library.o -o simple_string_matching $(CXX) $(CXXFLAGS) simple_string_matching.o Rabin_fingerprint.o general_library.o processes.o -o simple_string_matching
simple_string_matching.o: simple_string_matching.cpp simple_string_matching.o: simple_string_matching.cpp
$(CXX) $(CXXFLAGS) -c simple_string_matching.cpp $(CXX) $(CXXFLAGS) -c simple_string_matching.cpp
@ -36,6 +36,9 @@ Rabin_fingerprint.o: Rabin_fingerprint.cpp Rabin_fingerprint.hpp
general_library.o: general_library.cpp general_library.hpp general_library.o: general_library.cpp general_library.hpp
$(CXX) $(CXXFLAGS) -c general_library.cpp $(CXX) $(CXXFLAGS) -c general_library.cpp
processes.o: processes.cpp processes.hpp
$(CXX) $(CXXFLAGS) -c processes.cpp
porat-porat: porat-porat.cpp porat-porat: porat-porat.cpp
# Tell the compiler that 'clean' isn't referring to a file # Tell the compiler that 'clean' isn't referring to a file

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@ -14,7 +14,7 @@ class Rabin_fingerprint {
void push_bit (bool b); void push_bit (bool b);
void shift_bit (bool b); void shift_bit (bool b);
void slide_char (char c_in, char c_out); void slide_char (char c_in, char c_out);
void slide_bit (bool b1, bool b2); void slide_bit (bool b_in, bool b_out);
uint32_t get_fingerprint(); uint32_t get_fingerprint();

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29
processes.cpp Normal file
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@ -0,0 +1,29 @@
#include "processes.hpp"
Rabin_fingerprint_process::Rabin_fingerprint_process(uint32_t irr_poly, size_t window_size_in_bits)
: window_size_in_bits(window_size_in_bits),
phi(irr_poly, window_size_in_bits)
{}
void Rabin_fingerprint_process::stream_char (char c) {
std::bitset<8> b(c);
for (char i = 7; i >= 0; i--) {
stream_bit((bool)b[i]);
}
}
void Rabin_fingerprint_process::stream_bit (bool b) {
if (window.size() == window_size_in_bits) {
window.push(b);
bool b_out = window.front();
window.pop();
phi.slide_bit(b, b_out);
} else {
window.push(b);
phi.push_bit(b);
}
}
uint32_t Rabin_fingerprint_process::get_fingerprint () {
return phi.get_fingerprint();
}

23
processes.hpp Normal file
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@ -0,0 +1,23 @@
#ifndef PROCESSES_H
#define PROCESSES_H
#include "Rabin_fingerprint.hpp"
#include "general_library.hpp"
#include <stdint.h>
#include <queue>
class Rabin_fingerprint_process {
public:
Rabin_fingerprint_process(uint32_t irr_poly, size_t window_size_in_bits);
void stream_char(char c);
void stream_bit(bool b);
uint32_t get_fingerprint();
private:
std::queue<bool> window;
size_t window_size_in_bits;
Rabin_fingerprint phi;
};
#endif

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simple_string_matching Executable file

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@ -1,6 +1,7 @@
/* #define NDEBUG */ /* #define NDEBUG */
#include "Rabin_fingerprint.hpp" /* #include "Rabin_fingerprint.hpp" */
#include "general_library.hpp" /* #include "general_library.hpp" */
#include "processes.hpp"
#include <iostream> #include <iostream>
#include <stdint.h> #include <stdint.h>
@ -21,11 +22,7 @@ int main() {
std::string T( (std::istreambuf_iterator<char>(ifs) ), std::string T( (std::istreambuf_iterator<char>(ifs) ),
(std::istreambuf_iterator<char>() ) ); (std::istreambuf_iterator<char>() ) );
/* std::string T = "Hello, this is my test string averylongword is a necessary word to exceed the 32 bit window."; */
// Test without the modulo polynomial - and two matches
std::string P = "word"; std::string P = "word";
// Test with the modulo polynomial
/* std::string P = "averylongword"; */
std::cout << "Searching for pattern:" << std::endl; std::cout << "Searching for pattern:" << std::endl;
std::cout << " " << P << std::endl; std::cout << " " << P << std::endl;
@ -33,27 +30,24 @@ int main() {
/* std::cout << " " << T << std::endl; */ /* std::cout << " " << T << std::endl; */
std::cout << std::endl; std::cout << std::endl;
/* uint32_t polynomial = pow(2, 30) + pow(2, 2) + 1; // x^31 + x^3 + 1 */ uint32_t irreducible_polynomial = get_random_irreducible_polynomial_in_Z2(31);
uint32_t polynomial = get_random_irreducible_polynomial_in_Z2(31);
/* uint32_t polynomial = 0b11010011100100000111101011110111; */
// Test without the modulo polynomial
size_t window_size_in_bits = P.length()*8; size_t window_size_in_bits = P.length()*8;
// Hash the pattern // Hash the pattern
Rabin_fingerprint fP(polynomial, window_size_in_bits); Rabin_fingerprint_process phiP(irreducible_polynomial, (size_t)window_size_in_bits);
for (char c : P) for (char c : P)
fP.push_char(c); phiP.stream_char(c);
// Hash the text // Hash the text
Rabin_fingerprint fT(polynomial, window_size_in_bits); Rabin_fingerprint_process phiT(irreducible_polynomial, window_size_in_bits);
for (size_t i = 0; i < P.length(); i++) for (size_t i = 0; i < P.length(); i++)
fT.push_char(T[i]); phiT.stream_char(T[i]);
if (fT.get_fingerprint() == fP.get_fingerprint()) if (phiT.get_fingerprint() == phiP.get_fingerprint())
print_match(0, P.length(), T); print_match(0, P.length(), T);
for (size_t i = P.length(); i < T.length(); i++) { for (size_t i = P.length(); i < T.length(); i++) {
fT.slide_char(T[i], T[i-P.length()]); phiT.stream_char(T[i]);
if (fT.get_fingerprint() == fP.get_fingerprint()) if (phiT.get_fingerprint() == phiP.get_fingerprint())
print_match(i-P.length()+1, P.length(), T); print_match(i-P.length()+1, P.length(), T);
} }